Functional enrichment based on given reference annotations — enrichment_custom • Omix

Functional enrichment based on given reference annotations

enrichment_custom(genes, reference, genesets, adj = "fdr", verbose = FALSE)

Arguments

genes: Gene list (vector)
reference: Reference background (vector)
genesets: List of genesets
adj: Multiple testing adjustment method. Default to 'fdr'
verbose: Default to FALSE

Value

Functional enrichment result

See also

Other Enrichment analysis: GSEA(), cell_type_enrichment(), integrated_enrichment_mutliGSEA(), pathway_analysis_enrichr()