volcano_plot_limma.RdBuilds a volcano plot from limma results
volcano_plot_limma(dt, log2FoldChange = 0, padj = 0.05)Formatted Differential expression results from format_res_limma()
Log2FC absolute threshold
adjusted p value threshold. Default to 0.05
Volcano plot
Other Plotting:
circular_corrplot(),
communities_network(),
community_graph(),
correlation_heatmap_clusters(),
correlation_heatmap_supervised(),
correlation_heatmap(),
getStdiz(),
interactive_network(),
multiomics_heatmap(),
plot_OpenTarget(),
plot_communities(),
plot_components(),
plot_loadings(),
plot_optimal_cluster(),
visualise_pathway(),
volcano_interactive_comparison(),
volcano_interactive(),
volcano_plot_deseq()