Vertical integration with MBPLS — integrate_with_MBPLS • Omix

Vertical integration with MBPLS

integrate_with_MBPLS(multimodal_omics, Y, design, ncomp)

Arguments

multimodal_omics: multimodal_object generated by get_multimodal_object
Y: Outcome variable
design: Available values are cor, full, avg. Possible designs for integration are cor(strength of correlation between PC1 of omics layers) or full (The strength of all relationships between dataframes is maximised (= 1) – a “fully connected” design)
ncomp: Number of components

Value

a list object with multimodal_object and model slots

See also

Other Multi-omic integration: getClustNum(), integrate_with_DIABLO(), integrate_with_MEFISTO(), integrate_with_MOFA(), integrate_with_iCluster(), integrate_with_sMBPLS(), vertical_integration()