Vertical integration with MOFA — integrate_with_MOFA • Omix

Vertical integration with MOFA

integrate_with_MOFA(
  multimodal_omics,
  num_factors = 5,
  scale_views = TRUE,
  metadata
)

Arguments

multimodal_omics: multimodal_object generated by get_multimodal_object
num_factors: Number of factors
scale_views: Logical whether to scale omics layers
metadata: sample metadata

Value

a list object with multimodal_object and model slots

See also

Other Multi-omic integration: getClustNum(), integrate_with_DIABLO(), integrate_with_MBPLS(), integrate_with_MEFISTO(), integrate_with_iCluster(), integrate_with_sMBPLS(), vertical_integration()