Get multiomics networks from multimodal object — multiomics_network_matrix • Omix

Get multiomics networks from multimodal object

multiomics_network_matrix(multimodal_object, list, correlation_threshold = 0.5)

Arguments

multimodal_object: multimodal_object generated by get_multimodal_object
list: Named list of processed omic slots and features of interest
correlation_threshold: Absolute correlation threshold to draw edges in the network

Value

List containing graph and matrix slots

See also

Other Multi-omic integration downstream analysis: OpenTarget_dataframe(), Transcription_Factor_enrichment_supervised(), Transcription_Factor_enrichment(), circos_TF(), clustering_DE_analysis(), extract_loadings(), extract_multiomic_signature(), extract_weigths(), integrative_results_clustering(), integrative_results_sparse_supervised(), integrative_results_supervised(), integrative_results_unsupervised(), multiomics_modules(), multiomics_network(), plot_module_trajectory(), posterior_probability(), pseudotime_inference(), sign_signature()