PLot scaled changes in modules eigenvalue alongside inferred_psuedotime — plot_module_trajectory • Omix

PLot scaled changes in modules eigenvalue alongside inferred_psuedotime

plot_module_trajectory(
  modules,
  covariates = c("amyloid", "AT8", "PHF1"),
  plot_modules = c("ME1", "ME2", "ME3", "ME4")
)

Arguments

modules: List object generated by multiomics_modules()
covariates: covariates to add on plot
plot_modules: Modules of interest for plot

Value

ggplot

See also

Other Multi-omic integration downstream analysis: OpenTarget_dataframe(), Transcription_Factor_enrichment_supervised(), Transcription_Factor_enrichment(), circos_TF(), clustering_DE_analysis(), extract_loadings(), extract_multiomic_signature(), extract_weigths(), integrative_results_clustering(), integrative_results_sparse_supervised(), integrative_results_supervised(), integrative_results_unsupervised(), multiomics_modules(), multiomics_network_matrix(), multiomics_network(), posterior_probability(), pseudotime_inference(), sign_signature()